Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AL591846.1-201ENST00000451736 433 ntBASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.21■□□□□ 0.03
HAPLN3Q96S86 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC100827.2-201ENST00000563214 1194 ntBASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HAPLN3Q96S86 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
HAPLN3Q96S86 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AC215219.1-201ENST00000400706 1817 ntBASIC15.2■□□□□ 0.02
HAPLN3Q96S86 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AC244394.1-201ENST00000435000 1665 ntBASIC15.2■□□□□ 0.02
HAPLN3Q96S86 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 MIR6720-201ENST00000611664 98 ntBASIC15.2■□□□□ 0.02
HAPLN3Q96S86 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 AL096828.3-201ENST00000615354 462 ntBASIC15.2■□□□□ 0.02
HAPLN3Q96S86 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.2■□□□□ 0.02
HAPLN3Q96S86 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms