Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 BCRP2-202ENST00000447763 634 ntBASIC13.98□□□□□ -0.17
COL21A1Q96P44 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 BCRP6-201ENST00000510112 632 ntBASIC13.98□□□□□ -0.17
COL21A1Q96P44 BCRP7-201ENST00000511549 544 ntBASIC13.98□□□□□ -0.17
COL21A1Q96P44 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AC145423.3-201ENST00000615987 467 ntBASIC13.98□□□□□ -0.17
COL21A1Q96P44 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 MST1P2-201ENST00000457982 2291 ntBASIC13.97□□□□□ -0.17
COL21A1Q96P44 AC138969.2-201ENST00000532739 9932 ntBASIC13.97□□□□□ -0.17
COL21A1Q96P44 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 KRT43P-201ENST00000434019 910 ntBASIC13.97□□□□□ -0.17
COL21A1Q96P44 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 AC106760.1-201ENST00000508690 800 ntBASIC13.97□□□□□ -0.17
COL21A1Q96P44 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.97□□□□□ -0.17
COL21A1Q96P44 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 CICP17-201ENST00000418553 2377 ntBASIC13.97□□□□□ -0.17
COL21A1Q96P44 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
COL21A1Q96P44 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
COL21A1Q96P44 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
COL21A1Q96P44 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
COL21A1Q96P44 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms