Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
HPS1Q92902 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 SERBP1P5-201ENST00000510079 1181 ntBASIC13.65□□□□□ -0.22
HPS1Q92902 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.65□□□□□ -0.22
HPS1Q92902 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC13.65□□□□□ -0.22
HPS1Q92902 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC13.65□□□□□ -0.22
HPS1Q92902 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 AC004233.3-201ENST00000607794 1269 ntBASIC13.65□□□□□ -0.22
HPS1Q92902 GAPDHP74-202ENST00000632456 782 ntBASIC13.65□□□□□ -0.22
HPS1Q92902 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.65□□□□□ -0.22
HPS1Q92902 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
HPS1Q92902 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 DNM1P41-201ENST00000623634 3350 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 AP001282.1-201ENST00000531301 1499 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 MRPS18AP1-201ENST00000414458 589 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC13.64□□□□□ -0.23
HPS1Q92902 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.64□□□□□ -0.23
HPS1Q92902 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC144521.1-201ENST00000607148 956 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 AL589739.1-201ENST00000607720 493 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC133485.6-201ENST00000624045 688 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 PCDHB18P-202ENST00000526308 3197 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HPS1Q92902 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
HPS1Q92902 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 AC015818.8-201ENST00000587907 1519 ntBASIC13.64□□□□□ -0.23
HPS1Q92902 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HPS1Q92902 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms