Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDH19Q8TAB3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 HSPA8P5-201ENST00000456928 2069 ntBASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 CNN2P10-201ENST00000443067 918 ntBASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH19Q8TAB3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 FAM86MP-201ENST00000340703 885 ntBASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AC010141.1-201ENST00000411585 623 ntBASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 CSF2RBP1-201ENST00000447905 391 ntBASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AC008825.2-201ENST00000603374 718 ntBASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AC027601.3-201ENST00000622907 509 ntBASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH19Q8TAB3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH19Q8TAB3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms