Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 MIR663B-201ENST00000408361 115 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 GHSR-202ENST00000427970 912 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AC004898.1-201ENST00000451057 766 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 FTLP10-202ENST00000505798 471 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AC004466.1-201ENST00000599515 1080 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AC138466.3-201ENST00000619983 221 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 CLUHP2-201ENST00000426660 1303 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 AC023024.2-201ENST00000623561 1993 ntBASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.58□□□□□ -0.4
CLDND2Q8NHS1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 CICP20-201ENST00000443330 2801 ntBASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 AP003171.2-201ENST00000528208 925 ntBASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 AC244452.3-201ENST00000636814 210 ntBASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CLDND2Q8NHS1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms