Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 COX20P2-201ENST00000452636 358 ntBASIC13.79□□□□□ -0.2
NUP43Q8NFH3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 COX5BP1-201ENST00000507622 393 ntBASIC13.79□□□□□ -0.2
NUP43Q8NFH3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 AL590440.2-201ENST00000641973 1595 ntBASIC13.79□□□□□ -0.2
NUP43Q8NFH3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NUP43Q8NFH3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 MIR4683-201ENST00000579659 81 ntBASIC13.78□□□□□ -0.2
NUP43Q8NFH3 RN7SL713P-201ENST00000582127 302 ntBASIC13.78□□□□□ -0.2
NUP43Q8NFH3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.78□□□□□ -0.2
NUP43Q8NFH3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NUP43Q8NFH3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms