Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 FXNP2-201ENST00000411625 547 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 NUP210P1-202ENST00000504322 710 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 MIR4783-201ENST00000580343 82 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 RN7SL574P-201ENST00000581512 297 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 MIR4706-201ENST00000582134 82 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AL805961.1-203ENST00000641078 1258 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 AC139749.1-202ENST00000617529 3139 ntBASIC16.01■□□□□ 0.15
VPS52Q8N1B4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS52Q8N1B4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 AC009093.2-202ENST00000620513 2079 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16■□□□□ 0.15
VPS52Q8N1B4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 SLC16A6P1-201ENST00000413214 1059 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 MPRIPP1-201ENST00000452433 1089 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 AC012618.1-201ENST00000461223 412 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16■□□□□ 0.15
VPS52Q8N1B4 HNRNPA1P36-201ENST00000521313 955 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16■□□□□ 0.15
VPS52Q8N1B4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16■□□□□ 0.15
VPS52Q8N1B4 MIR3907-201ENST00000579424 151 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 AC005324.6-201ENST00000587972 613 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 AC009955.4-201ENST00000597192 544 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
VPS52Q8N1B4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
VPS52Q8N1B4 AC068587.8-201ENST00000641239 219 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
VPS52Q8N1B4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 AL359258.3-201ENST00000622910 2331 ntBASIC16■□□□□ 0.15
VPS52Q8N1B4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16■□□□□ 0.15
VPS52Q8N1B4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS52Q8N1B4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 SHC1P1-201ENST00000425230 1745 ntBASIC15.99■□□□□ 0.15
VPS52Q8N1B4 AC126335.2-201ENST00000623362 4637 ntBASIC15.99■□□□□ 0.15
VPS52Q8N1B4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 AC005089.1-201ENST00000619486 2241 ntBASIC15.99■□□□□ 0.15
VPS52Q8N1B4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS52Q8N1B4 MAGEA5-201ENST00000446757 942 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms