Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC084018.2-201ENST00000613093 2607 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 MIR600HG-201ENST00000449175 5984 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 PYY2-201ENST00000315776 282 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 OR8T1P-201ENST00000421347 918 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC068867.1-201ENST00000559855 150 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC002044.2-201ENST00000624910 970 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 AC015688.4-201ENST00000580780 1647 ntBASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LYSMD4Q5XG99 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A21P-201ENST00000510875 1396 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A15P-201ENST00000514465 1395 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A6P-201ENST00000515148 1394 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A16P-201ENST00000526662 1395 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A9P-201ENST00000527940 1395 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A5P-201ENST00000528738 1395 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A14P-201ENST00000530386 1395 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FAM90A13P-201ENST00000534703 1395 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CTBP2P8-201ENST00000422584 1330 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 RN7SL396P-201ENST00000471086 295 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 AC090386.2-201ENST00000623010 1039 ntBASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LYSMD4Q5XG99 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms