Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 AC004241.5-201ENST00000623870 2448 ntBASIC14.46□□□□□ -0.09
SFT2D3Q587I9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 OR8S1-201ENST00000310194 1080 ntBASIC14.46□□□□□ -0.09
SFT2D3Q587I9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 GAPDHP40-201ENST00000505218 1006 ntBASIC14.46□□□□□ -0.09
SFT2D3Q587I9 AP001582.1-201ENST00000525856 295 ntBASIC14.46□□□□□ -0.09
SFT2D3Q587I9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 CLUHP6-201ENST00000580789 941 ntBASIC14.46□□□□□ -0.09
SFT2D3Q587I9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 AC005252.2-201ENST00000624630 1141 ntBASIC14.46□□□□□ -0.09
SFT2D3Q587I9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SFT2D3Q587I9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SFT2D3Q587I9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 KRT17P8-201ENST00000540749 863 ntBASIC14.45□□□□□ -0.1
SFT2D3Q587I9 PTP4A1P2-201ENST00000546033 454 ntBASIC14.45□□□□□ -0.1
SFT2D3Q587I9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AP001063.1-201ENST00000568332 529 ntBASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AC009486.1-201ENST00000569860 813 ntBASIC14.45□□□□□ -0.1
SFT2D3Q587I9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AL162274.1-201ENST00000617191 1098 ntBASIC14.45□□□□□ -0.1
SFT2D3Q587I9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 AL138799.1-201ENST00000448213 1675 ntBASIC14.45□□□□□ -0.1
SFT2D3Q587I9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.45□□□□□ -0.1
SFT2D3Q587I9 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFT2D3Q587I9 AC067750.1-201ENST00000608826 6545 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms