Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
DDR1Q08345 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.91■□□□□ 0.46
DDR1Q08345 MIR1301-201ENST00000408518 82 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 OR51A9P-201ENST00000422578 911 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.91■□□□□ 0.46
DDR1Q08345 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 BPIFB5P-201ENST00000457066 1099 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 AC006529.1-201ENST00000459978 637 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
DDR1Q08345 RN7SL767P-201ENST00000493013 295 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 AC090136.2-201ENST00000517809 420 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.91■□□□□ 0.46
DDR1Q08345 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.91■□□□□ 0.46
DDR1Q08345 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDR1Q08345 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.91■□□□□ 0.46
DDR1Q08345 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
DDR1Q08345 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
DDR1Q08345 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.91■□□□□ 0.46
DDR1Q08345 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
DDR1Q08345 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
DDR1Q08345 AC019109.1-201ENST00000401725 1874 ntBASIC17.9■□□□□ 0.46
DDR1Q08345 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.9■□□□□ 0.46
DDR1Q08345 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DDR1Q08345 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.9■□□□□ 0.46
DDR1Q08345 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DDR1Q08345 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 AC023824.1-201ENST00000562945 2975 ntBASIC17.9■□□□□ 0.46
DDR1Q08345 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 RN7SL375P-201ENST00000492442 298 ntBASIC17.9■□□□□ 0.46
DDR1Q08345 KRT18P37-201ENST00000520711 1282 ntBASIC17.9■□□□□ 0.46
DDR1Q08345 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.9■□□□□ 0.46
DDR1Q08345 AC091769.1-201ENST00000619576 568 ntBASIC17.9■□□□□ 0.46
DDR1Q08345 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
DDR1Q08345 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
DDR1Q08345 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.9■□□□□ 0.46
DDR1Q08345 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.89■□□□□ 0.45
DDR1Q08345 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.89■□□□□ 0.45
DDR1Q08345 OR52M2P-201ENST00000414298 959 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.89■□□□□ 0.45
DDR1Q08345 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.89■□□□□ 0.45
DDR1Q08345 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 RN7SL788P-201ENST00000460504 316 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 ALG1L3P-201ENST00000503331 765 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 CHCHD2P2-201ENST00000503744 321 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.89■□□□□ 0.45
DDR1Q08345 AC005740.1-201ENST00000515639 522 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 AC092862.1-201ENST00000541534 533 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.89■□□□□ 0.45
DDR1Q08345 SNORD3B-1-201ENST00000577988 758 ntBASIC17.89■□□□□ 0.45
DDR1Q08345 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.89■□□□□ 0.45
DDR1Q08345 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
DDR1Q08345 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms