Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.49□□□□□ -0.41
COL10A1Q03692 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 COX5BP8-201ENST00000416911 349 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 TPT1P11-201ENST00000458482 498 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 FTLP10-202ENST00000505798 471 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 CR383656.12-201ENST00000549567 513 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 AC025279.2-201ENST00000569730 653 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 GNRHR2-203ENST00000581100 1187 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.49□□□□□ -0.41
COL10A1Q03692 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 AC138466.3-201ENST00000619983 221 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 AC132938.4-201ENST00000623835 848 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.49□□□□□ -0.41
COL10A1Q03692 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 LINC01230-201ENST00000625222 3017 ntBASIC12.49□□□□□ -0.41
COL10A1Q03692 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.49□□□□□ -0.41
COL10A1Q03692 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COL10A1Q03692 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.49□□□□□ -0.41
COL10A1Q03692 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 RN7SKP230-201ENST00000365642 335 ntBASIC12.48□□□□□ -0.41
COL10A1Q03692 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 AC092933.1-201ENST00000393644 945 ntBASIC12.48□□□□□ -0.41
COL10A1Q03692 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.48□□□□□ -0.41
COL10A1Q03692 NME2P1-201ENST00000426182 414 ntBASIC12.48□□□□□ -0.41
COL10A1Q03692 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 KRT17P7-201ENST00000451704 1104 ntBASIC12.48□□□□□ -0.41
COL10A1Q03692 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.48□□□□□ -0.41
COL10A1Q03692 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.48□□□□□ -0.41
COL10A1Q03692 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.48□□□□□ -0.41
COL10A1Q03692 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.48□□□□□ -0.41
COL10A1Q03692 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 BTNL10-201ENST00000595971 695 ntBASIC12.48□□□□□ -0.41
COL10A1Q03692 ECM1P1-201ENST00000604092 1279 ntBASIC12.48□□□□□ -0.41
COL10A1Q03692 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
COL10A1Q03692 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.48□□□□□ -0.41
COL10A1Q03692 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.48□□□□□ -0.41
COL10A1Q03692 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL10A1Q03692 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms