Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.46□□□□□ -0.74
RPL39P62891 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.46□□□□□ -0.74
RPL39P62891 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
RPL39P62891 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RPL39P62891 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 AC072061.1-201ENST00000569710 2234 ntBASIC10.45□□□□□ -0.74
RPL39P62891 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 AC215219.1-201ENST00000400706 1817 ntBASIC10.45□□□□□ -0.74
RPL39P62891 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.45□□□□□ -0.74
RPL39P62891 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 AL512361.1-201ENST00000554200 418 ntBASIC10.45□□□□□ -0.74
RPL39P62891 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.45□□□□□ -0.74
RPL39P62891 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
RPL39P62891 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 AC004461.2-201ENST00000629517 803 ntBASIC10.45□□□□□ -0.74
RPL39P62891 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 AL118506.1-201ENST00000601296 3082 ntBASIC10.45□□□□□ -0.74
RPL39P62891 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.45□□□□□ -0.74
RPL39P62891 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.45□□□□□ -0.74
RPL39P62891 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RPL39P62891 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.44□□□□□ -0.74
RPL39P62891 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 CLK3P2-201ENST00000427566 1453 ntBASIC10.44□□□□□ -0.74
RPL39P62891 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.44□□□□□ -0.74
RPL39P62891 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RPL39P62891 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
RPL39P62891 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms