Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNRPFP62306 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 AC136759.1-202ENST00000530858 2194 ntBASIC15.89■□□□□ 0.13
SNRPFP62306 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNRPFP62306 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SNRPFP62306 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.89■□□□□ 0.13
SNRPFP62306 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.89■□□□□ 0.13
SNRPFP62306 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.89■□□□□ 0.13
SNRPFP62306 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.89■□□□□ 0.13
SNRPFP62306 AC124068.2-201ENST00000569473 1109 ntBASIC15.89■□□□□ 0.13
SNRPFP62306 AC005962.1-201ENST00000584100 773 ntBASIC15.89■□□□□ 0.13
SNRPFP62306 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.89■□□□□ 0.13
SNRPFP62306 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 AC090386.2-201ENST00000623010 1039 ntBASIC15.89■□□□□ 0.13
SNRPFP62306 HSPA8P5-201ENST00000456928 2069 ntBASIC15.89■□□□□ 0.13
SNRPFP62306 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 LAP3P2-201ENST00000454686 1454 ntBASIC15.89■□□□□ 0.13
SNRPFP62306 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
SNRPFP62306 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNRPFP62306 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNRPFP62306 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
SNRPFP62306 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.88■□□□□ 0.13
SNRPFP62306 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRPFP62306 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRPFP62306 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SNRPFP62306 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.88■□□□□ 0.13
SNRPFP62306 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.88■□□□□ 0.13
SNRPFP62306 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.88■□□□□ 0.13
SNRPFP62306 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.88■□□□□ 0.13
SNRPFP62306 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRPFP62306 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.88■□□□□ 0.13
SNRPFP62306 AC022748.3-201ENST00000621828 275 ntBASIC15.88■□□□□ 0.13
SNRPFP62306 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.88■□□□□ 0.13
SNRPFP62306 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 MIR600HG-201ENST00000449175 5984 ntBASIC15.88■□□□□ 0.13
SNRPFP62306 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.88■□□□□ 0.13
SNRPFP62306 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNRPFP62306 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.88■□□□□ 0.13
SNRPFP62306 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SNRPFP62306 AC012617.1-204ENST00000586340 2305 ntBASIC15.88■□□□□ 0.13
SNRPFP62306 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRPFP62306 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SNRPFP62306 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SNRPFP62306 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRPFP62306 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 HLA-J-204ENST00000495278 958 ntBASIC15.87■□□□□ 0.13
SNRPFP62306 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SNRPFP62306 AC005730.2-201ENST00000564549 1184 ntBASIC15.87■□□□□ 0.13
SNRPFP62306 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.87■□□□□ 0.13
SNRPFP62306 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SNRPFP62306 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRPFP62306 AC104982.3-201ENST00000581995 514 ntBASIC15.87■□□□□ 0.13
SNRPFP62306 RN7SL163P-201ENST00000583100 276 ntBASIC15.87■□□□□ 0.13
SNRPFP62306 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.87■□□□□ 0.13
SNRPFP62306 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.87■□□□□ 0.13
SNRPFP62306 AC007663.3-201ENST00000609632 465 ntBASIC15.87■□□□□ 0.13
SNRPFP62306 AL591471.1-201ENST00000621855 229 ntBASIC15.87■□□□□ 0.13
SNRPFP62306 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SNRPFP62306 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNRPFP62306 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms