Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.68□□□□□ -0.38
AP3S2P59780 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.68□□□□□ -0.38
AP3S2P59780 KRT18P8-201ENST00000581937 1246 ntBASIC12.68□□□□□ -0.38
AP3S2P59780 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.68□□□□□ -0.38
AP3S2P59780 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 MIR6069-201ENST00000620069 79 ntBASIC12.68□□□□□ -0.38
AP3S2P59780 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.68□□□□□ -0.38
AP3S2P59780 AC010336.1-201ENST00000539278 4739 ntBASIC12.68□□□□□ -0.38
AP3S2P59780 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AP3S2P59780 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S2P59780 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S2P59780 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S2P59780 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 MKRN5P-201ENST00000445263 1467 ntBASIC12.67□□□□□ -0.38
AP3S2P59780 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
AP3S2P59780 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
AP3S2P59780 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 AC093909.1-201ENST00000504731 1122 ntBASIC12.67□□□□□ -0.38
AP3S2P59780 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S2P59780 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.67□□□□□ -0.38
AP3S2P59780 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S2P59780 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S2P59780 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 AL121912.1-201ENST00000603683 238 ntBASIC12.67□□□□□ -0.38
AP3S2P59780 AC009474.1-201ENST00000455096 1565 ntBASIC12.67□□□□□ -0.38
AP3S2P59780 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S2P59780 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S2P59780 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AP3S2P59780 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms