Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN6P56747 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN6P56747 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 HIST2H2BA-201ENST00000412169 381 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN6P56747 AC004837.1-201ENST00000446267 564 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 RPSAP15-201ENST00000448168 861 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLDN6P56747 AL157792.1-201ENST00000488281 530 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN6P56747 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLDN6P56747 TMCO5B-205ENST00000530020 894 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 MIR5196-201ENST00000578146 115 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.08□□□□□ -0.16
CLDN6P56747 AC005357.2-202ENST00000590507 1060 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 AC005041.3-201ENST00000606287 649 ntBASIC14.08□□□□□ -0.16
CLDN6P56747 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN6P56747 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.08□□□□□ -0.16
CLDN6P56747 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLDN6P56747 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN6P56747 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
CLDN6P56747 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.08□□□□□ -0.16
CLDN6P56747 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLDN6P56747 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CLDN6P56747 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.07□□□□□ -0.16
CLDN6P56747 BANF1P3-201ENST00000412556 261 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.07□□□□□ -0.16
CLDN6P56747 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.07□□□□□ -0.16
CLDN6P56747 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 AP003398.1-201ENST00000531124 318 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.07□□□□□ -0.16
CLDN6P56747 AC093752.3-201ENST00000567343 901 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 AC006158.1-201ENST00000610661 249 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CLDN6P56747 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 LINC00431-202ENST00000636375 159 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 KRT18P9-201ENST00000604826 1300 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.07□□□□□ -0.16
CLDN6P56747 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CLDN6P56747 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLDN6P56747 PPT1-215ENST00000641471 2368 ntBASIC14.07□□□□□ -0.16
CLDN6P56747 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN6P56747 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN6P56747 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN6P56747 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms