Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SUMO3P55854 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SUMO3P55854 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 POM121L10P-201ENST00000436994 1285 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 RPS2P32-201ENST00000439199 892 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 GOLGA2P4-201ENST00000441462 777 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.28□□□□□ -0.28
SUMO3P55854 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.28□□□□□ -0.28
SUMO3P55854 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.28□□□□□ -0.28
SUMO3P55854 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.28□□□□□ -0.28
SUMO3P55854 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 Z98259.2-201ENST00000641583 609 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SUMO3P55854 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 AC152010.1-201ENST00000415779 2006 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.28□□□□□ -0.28
SUMO3P55854 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 AC020910.6-201ENST00000623084 1459 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 TMBIM7P-202ENST00000641474 1516 ntBASIC13.28□□□□□ -0.28
SUMO3P55854 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SUMO3P55854 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.28□□□□□ -0.28
SUMO3P55854 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.27□□□□□ -0.28
SUMO3P55854 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.27□□□□□ -0.28
SUMO3P55854 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.27□□□□□ -0.28
SUMO3P55854 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SUMO3P55854 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.27□□□□□ -0.28
SUMO3P55854 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SUMO3P55854 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.27□□□□□ -0.28
SUMO3P55854 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SUMO3P55854 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.27□□□□□ -0.29
SUMO3P55854 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.27□□□□□ -0.29
SUMO3P55854 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.27□□□□□ -0.29
SUMO3P55854 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.27□□□□□ -0.29
SUMO3P55854 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 AC133540.1-201ENST00000620845 1019 ntBASIC13.27□□□□□ -0.29
SUMO3P55854 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.27□□□□□ -0.29
SUMO3P55854 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.27□□□□□ -0.29
SUMO3P55854 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SUMO3P55854 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 TCAM1P-207ENST00000485295 1537 ntBASIC13.27□□□□□ -0.29
SUMO3P55854 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SUMO3P55854 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SUMO3P55854 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.27□□□□□ -0.29
SUMO3P55854 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SUMO3P55854 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.27□□□□□ -0.29
SUMO3P55854 HSPA7-201ENST00000445535 1927 ntBASIC13.27□□□□□ -0.29
SUMO3P55854 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.27□□□□□ -0.29
SUMO3P55854 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms