Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 AC007686.3-201ENST00000619017 3487 ntBASIC18.66■□□□□ 0.58
BRPF1P55201 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC18.66■□□□□ 0.58
BRPF1P55201 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BRPF1P55201 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 AC012441.2-201ENST00000444843 739 ntBASIC18.66■□□□□ 0.58
BRPF1P55201 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
BRPF1P55201 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.66■□□□□ 0.58
BRPF1P55201 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.66■□□□□ 0.58
BRPF1P55201 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BRPF1P55201 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.66■□□□□ 0.58
BRPF1P55201 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BRPF1P55201 AC138627.1-207ENST00000641560 1006 ntBASIC18.66■□□□□ 0.58
BRPF1P55201 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.66■□□□□ 0.58
BRPF1P55201 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BRPF1P55201 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
BRPF1P55201 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BRPF1P55201 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRPF1P55201 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 TCAM1P-207ENST00000485295 1537 ntBASIC18.65■□□□□ 0.58
BRPF1P55201 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
BRPF1P55201 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BRPF1P55201 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.65■□□□□ 0.58
BRPF1P55201 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.65■□□□□ 0.58
BRPF1P55201 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.65■□□□□ 0.58
BRPF1P55201 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.65■□□□□ 0.58
BRPF1P55201 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 AC005695.3-201ENST00000614522 232 ntBASIC18.65■□□□□ 0.58
BRPF1P55201 AC022748.3-201ENST00000621828 275 ntBASIC18.65■□□□□ 0.58
BRPF1P55201 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.65■□□□□ 0.58
BRPF1P55201 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRPF1P55201 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
BRPF1P55201 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BRPF1P55201 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BRPF1P55201 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
BRPF1P55201 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BRPF1P55201 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.64■□□□□ 0.57
BRPF1P55201 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.64■□□□□ 0.57
BRPF1P55201 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.64■□□□□ 0.57
BRPF1P55201 MTX1P1-201ENST00000440904 838 ntBASIC18.64■□□□□ 0.57
BRPF1P55201 HIST2H2BC-201ENST00000498492 580 ntBASIC18.64■□□□□ 0.57
BRPF1P55201 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.64■□□□□ 0.57
BRPF1P55201 AC003686.1-201ENST00000550956 1034 ntBASIC18.64■□□□□ 0.57
BRPF1P55201 CHMP4BP1-201ENST00000556017 588 ntBASIC18.64■□□□□ 0.57
BRPF1P55201 AL160314.3-201ENST00000556041 767 ntBASIC18.64■□□□□ 0.57
BRPF1P55201 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BRPF1P55201 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
BRPF1P55201 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
BRPF1P55201 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.64■□□□□ 0.57
BRPF1P55201 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BRPF1P55201 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.64■□□□□ 0.57
BRPF1P55201 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 AC092978.1-202ENST00000637590 1327 ntBASIC18.64■□□□□ 0.57
BRPF1P55201 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BRPF1P55201 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRPF1P55201 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms