Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.03■□□□□ 0.16
NCKAP1LP55160 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.03■□□□□ 0.16
NCKAP1LP55160 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NCKAP1LP55160 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCKAP1LP55160 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCKAP1LP55160 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCKAP1LP55160 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCKAP1LP55160 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NCKAP1LP55160 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 NKAIN1P1-201ENST00000435754 582 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 AC104073.2-201ENST00000453737 312 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 AC003686.1-201ENST00000550956 1034 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 SNORD3B-2-202ENST00000571722 791 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.02■□□□□ 0.16
NCKAP1LP55160 AC243960.2-201ENST00000600996 747 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 AC090164.2-201ENST00000611487 516 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.02■□□□□ 0.16
NCKAP1LP55160 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCKAP1LP55160 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NCKAP1LP55160 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
NCKAP1LP55160 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NCKAP1LP55160 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 AC067930.6-201ENST00000623257 4947 ntBASIC16.02■□□□□ 0.15
NCKAP1LP55160 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.02■□□□□ 0.15
NCKAP1LP55160 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.02■□□□□ 0.15
NCKAP1LP55160 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCKAP1LP55160 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AC106794.1-201ENST00000506935 792 ntBASIC16.01■□□□□ 0.15
NCKAP1LP55160 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AC013355.1-201ENST00000562625 723 ntBASIC16.01■□□□□ 0.15
NCKAP1LP55160 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AL451050.2-201ENST00000606967 682 ntBASIC16.01■□□□□ 0.15
NCKAP1LP55160 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 AC012617.1-204ENST00000586340 2305 ntBASIC16.01■□□□□ 0.15
NCKAP1LP55160 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.01■□□□□ 0.15
NCKAP1LP55160 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCKAP1LP55160 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms