Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CDC34P49427 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 STK25-235ENST00000543554 2556 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC34P49427 AC004870.1-201ENST00000315132 882 ntBASIC11.7□□□□□ -0.54
CDC34P49427 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 AL592309.1-201ENST00000443127 649 ntBASIC11.7□□□□□ -0.54
CDC34P49427 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 RNA5SP416-201ENST00000516838 111 ntBASIC11.7□□□□□ -0.54
CDC34P49427 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CDC34P49427 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 RN7SL828P-201ENST00000607615 303 ntBASIC11.7□□□□□ -0.54
CDC34P49427 AL133215.2-201ENST00000609242 977 ntBASIC11.7□□□□□ -0.54
CDC34P49427 AL691432.3-201ENST00000621860 400 ntBASIC11.7□□□□□ -0.54
CDC34P49427 LINC00628-201ENST00000628516 1289 ntBASIC11.7□□□□□ -0.54
CDC34P49427 AF228730.6-201ENST00000641497 218 ntBASIC11.7□□□□□ -0.54
CDC34P49427 AC084121.3-201ENST00000641716 218 ntBASIC11.7□□□□□ -0.54
CDC34P49427 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 BX324167.2-201ENST00000623717 3316 ntBASIC11.7□□□□□ -0.54
CDC34P49427 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC34P49427 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.7□□□□□ -0.54
CDC34P49427 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC34P49427 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CDC34P49427 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CDC34P49427 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CDC34P49427 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 AL365181.3-201ENST00000605886 3222 ntBASIC11.69□□□□□ -0.54
CDC34P49427 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 AL035456.1-201ENST00000456064 1369 ntBASIC11.69□□□□□ -0.54
CDC34P49427 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 AOC4P-203ENST00000566825 2289 ntBASIC11.69□□□□□ -0.54
CDC34P49427 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 TOMM22P5-201ENST00000416399 439 ntBASIC11.69□□□□□ -0.54
CDC34P49427 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC34P49427 RPL13P2-201ENST00000440687 659 ntBASIC11.69□□□□□ -0.54
CDC34P49427 SERBP1P3-201ENST00000459980 809 ntBASIC11.69□□□□□ -0.54
CDC34P49427 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.69□□□□□ -0.54
CDC34P49427 RNA5SP419-201ENST00000515908 135 ntBASIC11.69□□□□□ -0.54
CDC34P49427 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.69□□□□□ -0.54
CDC34P49427 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC34P49427 ALG1L8P-201ENST00000533887 760 ntBASIC11.69□□□□□ -0.54
CDC34P49427 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC34P49427 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms