Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
GDNFP39905 AC074044.1-201ENST00000609673 707 ntBASIC12.9□□□□□ -0.34
GDNFP39905 AC008738.7-201ENST00000609744 511 ntBASIC12.9□□□□□ -0.34
GDNFP39905 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.9□□□□□ -0.34
GDNFP39905 AC004461.2-201ENST00000629517 803 ntBASIC12.9□□□□□ -0.34
GDNFP39905 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.9□□□□□ -0.34
GDNFP39905 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
GDNFP39905 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GDNFP39905 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
GDNFP39905 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.9□□□□□ -0.35
GDNFP39905 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.9□□□□□ -0.35
GDNFP39905 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.9□□□□□ -0.35
GDNFP39905 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GDNFP39905 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
GDNFP39905 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 AL589987.1-201ENST00000453380 819 ntBASIC12.89□□□□□ -0.35
GDNFP39905 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 AC093214.1-201ENST00000511688 1107 ntBASIC12.89□□□□□ -0.35
GDNFP39905 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.89□□□□□ -0.35
GDNFP39905 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 AC004840.1-201ENST00000636359 365 ntBASIC12.89□□□□□ -0.35
GDNFP39905 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
GDNFP39905 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GDNFP39905 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
GDNFP39905 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.89□□□□□ -0.35
GDNFP39905 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
GDNFP39905 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
GDNFP39905 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.88□□□□□ -0.35
GDNFP39905 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
GDNFP39905 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.88□□□□□ -0.35
GDNFP39905 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
GDNFP39905 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GDNFP39905 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.88□□□□□ -0.35
GDNFP39905 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms