Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC18.34■□□□□ 0.53
COL15A1P39059 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.34■□□□□ 0.53
COL15A1P39059 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL15A1P39059 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC18.34■□□□□ 0.53
COL15A1P39059 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
COL15A1P39059 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.34■□□□□ 0.53
COL15A1P39059 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL15A1P39059 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.34■□□□□ 0.53
COL15A1P39059 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.34■□□□□ 0.53
COL15A1P39059 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.34■□□□□ 0.53
COL15A1P39059 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL15A1P39059 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 BRD7P5-201ENST00000299197 1822 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
COL15A1P39059 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.33■□□□□ 0.53
COL15A1P39059 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 BAK1P1-201ENST00000317045 636 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
COL15A1P39059 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.33■□□□□ 0.53
COL15A1P39059 AC010234.1-201ENST00000494599 870 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 HERC2P11-201ENST00000562845 725 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.33■□□□□ 0.53
COL15A1P39059 AC100756.2-201ENST00000569537 736 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 AL591471.1-201ENST00000621855 229 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 AC090386.2-201ENST00000623010 1039 ntBASIC18.33■□□□□ 0.53
COL15A1P39059 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.33■□□□□ 0.53
COL15A1P39059 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL15A1P39059 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.33■□□□□ 0.52
COL15A1P39059 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL15A1P39059 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.33■□□□□ 0.52
COL15A1P39059 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL15A1P39059 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.33■□□□□ 0.52
COL15A1P39059 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL15A1P39059 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL15A1P39059 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL15A1P39059 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL15A1P39059 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC18.32■□□□□ 0.52
COL15A1P39059 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 RN7SL665P-201ENST00000578793 300 ntBASIC18.32■□□□□ 0.52
COL15A1P39059 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 SIGLEC22P-201ENST00000599104 714 ntBASIC18.32■□□□□ 0.52
COL15A1P39059 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.32■□□□□ 0.52
COL15A1P39059 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 CICP14-201ENST00000629111 2732 ntBASIC18.32■□□□□ 0.52
COL15A1P39059 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.32■□□□□ 0.52
COL15A1P39059 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL15A1P39059 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.32■□□□□ 0.52
COL15A1P39059 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL15A1P39059 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC18.32■□□□□ 0.52
COL15A1P39059 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.32■□□□□ 0.52
COL15A1P39059 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.32■□□□□ 0.52
COL15A1P39059 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.32■□□□□ 0.52
COL15A1P39059 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL15A1P39059 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.32■□□□□ 0.52
COL15A1P39059 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.31■□□□□ 0.52
COL15A1P39059 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
COL15A1P39059 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL15A1P39059 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.31■□□□□ 0.52
COL15A1P39059 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.31■□□□□ 0.52
COL15A1P39059 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.31■□□□□ 0.52
COL15A1P39059 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms