Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KRT9P35527 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT9P35527 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 AC007969.1-201ENST00000433675 447 ntBASIC16.15■□□□□ 0.18
KRT9P35527 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.15■□□□□ 0.18
KRT9P35527 TMEM198B-204ENST00000484016 896 ntBASIC16.15■□□□□ 0.18
KRT9P35527 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
KRT9P35527 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT9P35527 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT9P35527 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.15■□□□□ 0.18
KRT9P35527 AP005019.2-201ENST00000615104 511 ntBASIC16.15■□□□□ 0.18
KRT9P35527 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.15■□□□□ 0.18
KRT9P35527 AL033527.5-201ENST00000641382 801 ntBASIC16.15■□□□□ 0.18
KRT9P35527 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 AC105206.1-202ENST00000314927 2368 ntBASIC16.15■□□□□ 0.18
KRT9P35527 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
KRT9P35527 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT9P35527 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 AC215219.1-201ENST00000400706 1817 ntBASIC16.15■□□□□ 0.18
KRT9P35527 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.15■□□□□ 0.18
KRT9P35527 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KRT9P35527 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 RNU1-114P-201ENST00000365297 166 ntBASIC16.14■□□□□ 0.17
KRT9P35527 ACKR1-201ENST00000368121 1240 ntBASIC16.14■□□□□ 0.17
KRT9P35527 DGCR5-201ENST00000399539 862 ntBASIC16.14■□□□□ 0.17
KRT9P35527 KLF2P2-201ENST00000416807 1039 ntBASIC16.14■□□□□ 0.17
KRT9P35527 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
KRT9P35527 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.14■□□□□ 0.17
KRT9P35527 WASH4P-201ENST00000564273 1246 ntBASIC16.14■□□□□ 0.17
KRT9P35527 AP001063.1-201ENST00000568332 529 ntBASIC16.14■□□□□ 0.17
KRT9P35527 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.14■□□□□ 0.17
KRT9P35527 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 AC005252.2-201ENST00000624630 1141 ntBASIC16.14■□□□□ 0.17
KRT9P35527 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 AC011498.7-201ENST00000624986 2027 ntBASIC16.14■□□□□ 0.17
KRT9P35527 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
KRT9P35527 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KRT9P35527 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.14■□□□□ 0.17
KRT9P35527 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
KRT9P35527 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.13■□□□□ 0.17
KRT9P35527 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
KRT9P35527 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRT9P35527 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KRT9P35527 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KRT9P35527 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
KRT9P35527 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.13■□□□□ 0.17
KRT9P35527 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 TLE1P1-201ENST00000422965 589 ntBASIC16.13■□□□□ 0.17
KRT9P35527 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KRT9P35527 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.13■□□□□ 0.17
KRT9P35527 CRB3P1-201ENST00000449338 276 ntBASIC16.13■□□□□ 0.17
KRT9P35527 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms