Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.88□□□□□ -0.67
CKS2P33552 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.88□□□□□ -0.67
CKS2P33552 AC105021.1-202ENST00000570572 669 ntBASIC10.88□□□□□ -0.67
CKS2P33552 SPDYE9P-201ENST00000570642 692 ntBASIC10.88□□□□□ -0.67
CKS2P33552 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 AL118506.1-201ENST00000601296 3082 ntBASIC10.88□□□□□ -0.67
CKS2P33552 AC064836.3-201ENST00000607928 673 ntBASIC10.88□□□□□ -0.67
CKS2P33552 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 SPDYE10P-202ENST00000612005 668 ntBASIC10.88□□□□□ -0.67
CKS2P33552 SPDYE8P-202ENST00000612377 668 ntBASIC10.88□□□□□ -0.67
CKS2P33552 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC10.88□□□□□ -0.67
CKS2P33552 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 UXT-AS1-201ENST00000590504 1525 ntBASIC10.88□□□□□ -0.67
CKS2P33552 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 AC118758.2-201ENST00000614242 2813 ntBASIC10.87□□□□□ -0.67
CKS2P33552 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS2P33552 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 AL031284.1-201ENST00000419297 478 ntBASIC10.87□□□□□ -0.67
CKS2P33552 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.87□□□□□ -0.67
CKS2P33552 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.87□□□□□ -0.67
CKS2P33552 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS2P33552 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 AL049840.3-201ENST00000602669 611 ntBASIC10.87□□□□□ -0.67
CKS2P33552 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 Z83851.2-201ENST00000609564 659 ntBASIC10.87□□□□□ -0.67
CKS2P33552 MIR7706-201ENST00000613747 67 ntBASIC10.87□□□□□ -0.67
CKS2P33552 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 TNRC18P1-201ENST00000502875 3650 ntBASIC10.87□□□□□ -0.67
CKS2P33552 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.87□□□□□ -0.67
CKS2P33552 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS2P33552 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS2P33552 AC090643.2-201ENST00000623442 2029 ntBASIC10.87□□□□□ -0.67
CKS2P33552 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CKS2P33552 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms