Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.26□□□□□ -0.13
HOXA6P31267 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXA6P31267 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HOXA6P31267 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.26□□□□□ -0.13
HOXA6P31267 ALG1L3P-201ENST00000503331 765 ntBASIC14.26□□□□□ -0.13
HOXA6P31267 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXA6P31267 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HOXA6P31267 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
HOXA6P31267 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.26□□□□□ -0.13
HOXA6P31267 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXA6P31267 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXA6P31267 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXA6P31267 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.26□□□□□ -0.13
HOXA6P31267 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HOXA6P31267 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
HOXA6P31267 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.26□□□□□ -0.13
HOXA6P31267 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HOXA6P31267 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.26□□□□□ -0.13
HOXA6P31267 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HOXA6P31267 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXA6P31267 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.25□□□□□ -0.13
HOXA6P31267 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 AL357373.1-201ENST00000394974 322 ntBASIC14.25□□□□□ -0.13
HOXA6P31267 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXA6P31267 AF274858.1-201ENST00000406288 372 ntBASIC14.25□□□□□ -0.13
HOXA6P31267 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.25□□□□□ -0.13
HOXA6P31267 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.25□□□□□ -0.13
HOXA6P31267 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXA6P31267 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HOXA6P31267 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.25□□□□□ -0.13
HOXA6P31267 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.25□□□□□ -0.13
HOXA6P31267 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 LINC00554-201ENST00000564841 3011 ntBASIC14.25□□□□□ -0.13
HOXA6P31267 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HOXA6P31267 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.25□□□□□ -0.13
HOXA6P31267 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA6P31267 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HOXA6P31267 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.24□□□□□ -0.13
HOXA6P31267 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms