Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 KRT8P28-201ENST00000433288 1390 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 MYADML-201ENST00000474610 2147 ntBASIC13.57□□□□□ -0.24
ABCD3P28288 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCD3P28288 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCD3P28288 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
ABCD3P28288 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCD3P28288 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 PFN1P12-201ENST00000455938 534 ntBASIC13.56□□□□□ -0.24
ABCD3P28288 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCD3P28288 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCD3P28288 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCD3P28288 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 AC100827.2-201ENST00000563214 1194 ntBASIC13.56□□□□□ -0.24
ABCD3P28288 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCD3P28288 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCD3P28288 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCD3P28288 AC104982.3-201ENST00000581995 514 ntBASIC13.56□□□□□ -0.24
ABCD3P28288 RN7SL219P-201ENST00000582872 296 ntBASIC13.56□□□□□ -0.24
ABCD3P28288 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.56□□□□□ -0.24
ABCD3P28288 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 AC244394.1-201ENST00000435000 1665 ntBASIC13.56□□□□□ -0.24
ABCD3P28288 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
ABCD3P28288 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ABCD3P28288 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 AC097359.2-201ENST00000604992 2389 ntBASIC13.56□□□□□ -0.24
ABCD3P28288 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCD3P28288 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCD3P28288 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCD3P28288 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCD3P28288 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 FAM58BP-201ENST00000439056 645 ntBASIC13.55□□□□□ -0.24
ABCD3P28288 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCD3P28288 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms