Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CHMLP26374 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHMLP26374 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHMLP26374 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMLP26374 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMLP26374 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMLP26374 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.67■□□□□ 0.42
CHMLP26374 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMLP26374 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHMLP26374 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMLP26374 AC005586.2-201ENST00000563946 837 ntBASIC17.67■□□□□ 0.42
CHMLP26374 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMLP26374 AC132192.2-201ENST00000596206 1147 ntBASIC17.67■□□□□ 0.42
CHMLP26374 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMLP26374 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHMLP26374 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMLP26374 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 AL023775.1-201ENST00000454907 1746 ntBASIC17.67■□□□□ 0.42
CHMLP26374 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMLP26374 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMLP26374 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 AL022313.4-201ENST00000562756 2046 ntBASIC17.66■□□□□ 0.42
CHMLP26374 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMLP26374 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMLP26374 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMLP26374 AL645933.1-201ENST00000440087 609 ntBASIC17.66■□□□□ 0.42
CHMLP26374 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMLP26374 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.66■□□□□ 0.42
CHMLP26374 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMLP26374 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMLP26374 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMLP26374 RAB43P1-201ENST00000561790 589 ntBASIC17.66■□□□□ 0.42
CHMLP26374 DUX4L46-201ENST00000566845 751 ntBASIC17.66■□□□□ 0.42
CHMLP26374 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMLP26374 AC009955.4-201ENST00000597192 544 ntBASIC17.66■□□□□ 0.42
CHMLP26374 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMLP26374 MIR6775-201ENST00000617557 69 ntBASIC17.66■□□□□ 0.42
CHMLP26374 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMLP26374 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMLP26374 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 AL359881.3-201ENST00000602640 1721 ntBASIC17.66■□□□□ 0.42
CHMLP26374 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMLP26374 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMLP26374 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMLP26374 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHMLP26374 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMLP26374 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHMLP26374 CICP4-201ENST00000447359 2812 ntBASIC17.65■□□□□ 0.42
CHMLP26374 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHMLP26374 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CHMLP26374 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMLP26374 AL161772.1-201ENST00000610494 4412 ntBASIC17.65■□□□□ 0.42
CHMLP26374 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMLP26374 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMLP26374 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMLP26374 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMLP26374 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMLP26374 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.65■□□□□ 0.42
CHMLP26374 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHMLP26374 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHMLP26374 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms