Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BMP3P12645 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BMP3P12645 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BMP3P12645 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BMP3P12645 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BMP3P12645 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BMP3P12645 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.85■□□□□ 0.29
BMP3P12645 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
BMP3P12645 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 AGGF1P1-201ENST00000509500 2073 ntBASIC16.84■□□□□ 0.29
BMP3P12645 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 OR2K2-202ENST00000374428 1038 ntBASIC16.84■□□□□ 0.29
BMP3P12645 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.84■□□□□ 0.29
BMP3P12645 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.84■□□□□ 0.29
BMP3P12645 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.84■□□□□ 0.29
BMP3P12645 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 RN7SL190P-201ENST00000582519 257 ntBASIC16.84■□□□□ 0.29
BMP3P12645 LINC01783-202ENST00000614408 828 ntBASIC16.84■□□□□ 0.29
BMP3P12645 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.84■□□□□ 0.29
BMP3P12645 BX284668.2-205ENST00000619677 828 ntBASIC16.84■□□□□ 0.29
BMP3P12645 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.84■□□□□ 0.29
BMP3P12645 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.84■□□□□ 0.29
BMP3P12645 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.84■□□□□ 0.29
BMP3P12645 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.84■□□□□ 0.29
BMP3P12645 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BMP3P12645 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
BMP3P12645 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
BMP3P12645 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
BMP3P12645 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
BMP3P12645 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
BMP3P12645 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.83■□□□□ 0.28
BMP3P12645 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.83■□□□□ 0.28
BMP3P12645 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.83■□□□□ 0.28
BMP3P12645 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 RN7SL67P-201ENST00000492147 296 ntBASIC16.83■□□□□ 0.28
BMP3P12645 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.83■□□□□ 0.28
BMP3P12645 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BMP3P12645 FAM90A2P-201ENST00000511144 1395 ntBASIC16.83■□□□□ 0.28
BMP3P12645 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 FAM90A25P-201ENST00000528404 1395 ntBASIC16.83■□□□□ 0.28
BMP3P12645 SORD2P-201ENST00000558556 1069 ntBASIC16.83■□□□□ 0.28
BMP3P12645 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.83■□□□□ 0.28
BMP3P12645 AC005586.2-201ENST00000563946 837 ntBASIC16.83■□□□□ 0.28
BMP3P12645 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 AC128714.1-201ENST00000637035 887 ntBASIC16.83■□□□□ 0.28
BMP3P12645 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BMP3P12645 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BMP3P12645 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms