Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.92□□□□□ -0.02
CDH16O75309 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 FAM86LP-201ENST00000478302 853 ntBASIC14.92□□□□□ -0.02
CDH16O75309 AC109322.1-201ENST00000524499 1264 ntBASIC14.92□□□□□ -0.02
CDH16O75309 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH16O75309 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH16O75309 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH16O75309 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH16O75309 AC036164.1-201ENST00000570544 333 ntBASIC14.92□□□□□ -0.02
CDH16O75309 AL049840.4-201ENST00000602422 811 ntBASIC14.92□□□□□ -0.02
CDH16O75309 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 AC004241.5-201ENST00000623870 2448 ntBASIC14.92□□□□□ -0.02
CDH16O75309 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH16O75309 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH16O75309 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH16O75309 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH16O75309 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
CDH16O75309 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH16O75309 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH16O75309 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH16O75309 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CDH16O75309 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.91□□□□□ -0.02
CDH16O75309 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.91□□□□□ -0.02
CDH16O75309 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH16O75309 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 AC093028.1-201ENST00000622998 982 ntBASIC14.91□□□□□ -0.02
CDH16O75309 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH16O75309 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH16O75309 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH16O75309 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CDH16O75309 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH16O75309 TUBB8P4-201ENST00000511806 1324 ntBASIC14.91□□□□□ -0.02
CDH16O75309 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH16O75309 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH16O75309 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH16O75309 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH16O75309 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH16O75309 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH16O75309 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH16O75309 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDH16O75309 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH16O75309 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms