Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KDELR3O43731 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.85□□□□□ -0.03
KDELR3O43731 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KDELR3O43731 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KDELR3O43731 AC011498.7-201ENST00000624986 2027 ntBASIC14.85□□□□□ -0.03
KDELR3O43731 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KDELR3O43731 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KDELR3O43731 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
KDELR3O43731 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
KDELR3O43731 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 MARK2P5-201ENST00000507649 634 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.84□□□□□ -0.03
KDELR3O43731 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.84□□□□□ -0.03
KDELR3O43731 AC003686.1-201ENST00000550956 1034 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 AC009779.1-201ENST00000551138 283 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 MIR3615-201ENST00000581999 87 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 AL132994.2-201ENST00000603120 687 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 AC064801.2-201ENST00000625052 1303 ntBASIC14.84□□□□□ -0.03
KDELR3O43731 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
KDELR3O43731 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
KDELR3O43731 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.84□□□□□ -0.03
KDELR3O43731 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KDELR3O43731 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
KDELR3O43731 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.83□□□□□ -0.03
KDELR3O43731 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
KDELR3O43731 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
KDELR3O43731 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.83□□□□□ -0.03
KDELR3O43731 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.83□□□□□ -0.03
KDELR3O43731 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 KRT18P36-201ENST00000411618 1276 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.83□□□□□ -0.04
KDELR3O43731 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.83□□□□□ -0.04
KDELR3O43731 EIF4HP1-201ENST00000453115 687 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.83□□□□□ -0.04
KDELR3O43731 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.83□□□□□ -0.04
KDELR3O43731 AC099548.2-209ENST00000480264 625 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
KDELR3O43731 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.83□□□□□ -0.04
KDELR3O43731 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.83□□□□□ -0.04
KDELR3O43731 AC124068.2-201ENST00000569473 1109 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 AC020914.3-201ENST00000594712 304 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 AC244093.1-201ENST00000610837 814 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 AC138649.2-201ENST00000615886 705 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 MIR6787-201ENST00000616675 61 ntBASIC14.83□□□□□ -0.04
KDELR3O43731 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
KDELR3O43731 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KDELR3O43731 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.83□□□□□ -0.04
KDELR3O43731 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.83□□□□□ -0.04
KDELR3O43731 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms