Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC004461.1-201ENST00000412461 403 ntBASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 MKNK2P1-201ENST00000437526 628 ntBASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 ELL2P1-201ENST00000413990 1906 ntBASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
MEIS3P1A6NDR6 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC114271.1-201ENST00000612689 2813 ntBASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 MYADML-201ENST00000474610 2147 ntBASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 KRT126P-201ENST00000549467 1181 ntBASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AC000095.1-201ENST00000603208 874 ntBASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.67□□□□□ -0.38
MEIS3P1A6NDR6 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms