Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 MIR4783-201ENST00000580343 82 ntBASIC13.97□□□□□ -0.17
LRIT2A6NDA9 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.97□□□□□ -0.17
LRIT2A6NDA9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 HSPA7-201ENST00000445535 1927 ntBASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 AC152010.1-201ENST00000415779 2006 ntBASIC13.97□□□□□ -0.17
LRIT2A6NDA9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT2A6NDA9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AC012617.1-204ENST00000586340 2305 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AL354877.1-201ENST00000424412 413 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 Z93015.1-201ENST00000451718 390 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 RPSAP36-202ENST00000494591 1261 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AC027237.1-201ENST00000560942 655 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 RN7SL560P-201ENST00000577943 264 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AL359881.2-201ENST00000602973 570 ntBASIC13.96□□□□□ -0.17
LRIT2A6NDA9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
LRIT2A6NDA9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.96□□□□□ -0.18
LRIT2A6NDA9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms