Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 AC135279.3-201ENST00000610945 1311 ntBASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 AL161729.1-201ENST00000604104 1402 ntBASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TSSC4Q9Y5U2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 AC142381.2-201ENST00000566120 298 ntBASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TSSC4Q9Y5U2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TSSC4Q9Y5U2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.72■□□□□ 0.43
TSSC4Q9Y5U2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 SYT6-210ENST00000641643 1587 ntBASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 EDA-201ENST00000338901 1233 ntBASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.71■□□□□ 0.43
TSSC4Q9Y5U2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 AC024257.2-201ENST00000549699 147 ntBASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TSSC4Q9Y5U2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 AL355001.2-201ENST00000620617 1191 ntBASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.69■□□□□ 0.42
TSSC4Q9Y5U2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TSSC4Q9Y5U2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TSSC4Q9Y5U2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms