Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 AC120024.1-201ENST00000562672 995 ntBASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 AL117328.2-201ENST00000624617 1940 ntBASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHA9Q9Y5H5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 KRT18P24-201ENST00000344739 1156 ntBASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHA9Q9Y5H5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 AC103834.1-201ENST00000520383 144 ntBASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHA9Q9Y5H5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA9Q9Y5H5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PCDHA9Q9Y5H5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHA9Q9Y5H5 CLDN5-201ENST00000403084 2357 ntBASIC21.89■■□□□ 1.1
PCDHA9Q9Y5H5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHA9Q9Y5H5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHA9Q9Y5H5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 THA1P-201ENST00000590384 1145 ntBASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHA9Q9Y5H5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 KRT8P33-201ENST00000508125 1423 ntBASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHA9Q9Y5H5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA9Q9Y5H5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHA9Q9Y5H5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA9Q9Y5H5 YBX1P4-201ENST00000392794 808 ntBASIC21.85■■□□□ 1.09
PCDHA9Q9Y5H5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHA9Q9Y5H5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA9Q9Y5H5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms