Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PCDHB11Q9Y5F2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHB11Q9Y5F2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHB11Q9Y5F2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHB11Q9Y5F2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 AL022069.1-201ENST00000568025 1636 ntBASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDHB11Q9Y5F2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 LINC00543-201ENST00000567234 1845 ntBASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 AC133561.4-201ENST00000566112 224 ntBASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 MIR4466-201ENST00000606121 54 ntBASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHB11Q9Y5F2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 AL161729.1-201ENST00000604104 1402 ntBASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHB11Q9Y5F2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 AC131274.2-201ENST00000580697 1507 ntBASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 AC141586.4-201ENST00000624558 1573 ntBASIC22.25■■□□□ 1.15
PCDHB11Q9Y5F2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB11Q9Y5F2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB11Q9Y5F2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB11Q9Y5F2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB11Q9Y5F2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB11Q9Y5F2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB11Q9Y5F2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB11Q9Y5F2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 AC004448.1-201ENST00000458332 883 ntBASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHB11Q9Y5F2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 SNX5-217ENST00000606557 1087 ntBASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 MIR6722-201ENST00000617286 78 ntBASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB11Q9Y5F2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
PCDHB11Q9Y5F2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.2■■□□□ 1.15
PCDHB11Q9Y5F2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms