Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
LSM5Q9Y4Y9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM5Q9Y4Y9 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.73■□□□□ 0.59
LSM5Q9Y4Y9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM5Q9Y4Y9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LSM5Q9Y4Y9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM5Q9Y4Y9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSM5Q9Y4Y9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 AC137767.1-201ENST00000602918 1920 ntBASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM5Q9Y4Y9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LSM5Q9Y4Y9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LSM5Q9Y4Y9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
LSM5Q9Y4Y9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM5Q9Y4Y9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 ECEL1P1-201ENST00000373592 1742 ntBASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 AC007375.3-201ENST00000600936 2314 ntBASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 AC092068.2-201ENST00000590491 1708 ntBASIC18.69■□□□□ 0.58
LSM5Q9Y4Y9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM5Q9Y4Y9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 DUX4L11-201ENST00000611504 1267 ntBASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 DUX4L12-201ENST00000614593 1267 ntBASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 DUX4L14-201ENST00000621227 1267 ntBASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms