Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 MIR6722-201ENST00000617286 78 ntBASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPH3AQ9Y2J0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPH3AQ9Y2J0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 MIR638-201ENST00000385237 100 ntBASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPH3AQ9Y2J0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPH3AQ9Y2J0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPH3AQ9Y2J0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPH3AQ9Y2J0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.74■□□□□ 0.91
RPH3AQ9Y2J0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPH3AQ9Y2J0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.74■□□□□ 0.91
RPH3AQ9Y2J0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.74■□□□□ 0.91
RPH3AQ9Y2J0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 AL117332.1-201ENST00000622628 974 ntBASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPH3AQ9Y2J0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 AL161729.1-201ENST00000604104 1402 ntBASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPH3AQ9Y2J0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 AL356740.2-201ENST00000601559 647 ntBASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 AC005703.6-201ENST00000623265 1329 ntBASIC20.71■□□□□ 0.91
RPH3AQ9Y2J0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms