Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL136162.1-201ENST00000607711 1078 ntBASIC20.92■□□□□ 0.94
LRFN1Q9P244 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRFN1Q9P244 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRFN1Q9P244 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN1Q9P244 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN1Q9P244 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.92■□□□□ 0.94
LRFN1Q9P244 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LRFN1Q9P244 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN1Q9P244 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN1Q9P244 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRFN1Q9P244 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN1Q9P244 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN1Q9P244 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN1Q9P244 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN1Q9P244 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN1Q9P244 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN1Q9P244 DUX4L19-201ENST00000557448 1267 ntBASIC20.91■□□□□ 0.94
LRFN1Q9P244 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN1Q9P244 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN1Q9P244 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.9■□□□□ 0.94
LRFN1Q9P244 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN1Q9P244 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN1Q9P244 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.9■□□□□ 0.94
LRFN1Q9P244 AC092171.4-201ENST00000609130 632 ntBASIC20.9■□□□□ 0.94
LRFN1Q9P244 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.9■□□□□ 0.94
LRFN1Q9P244 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.9■□□□□ 0.94
LRFN1Q9P244 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN1Q9P244 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN1Q9P244 AC009102.2-201ENST00000606772 1639 ntBASIC20.89■□□□□ 0.94
LRFN1Q9P244 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRFN1Q9P244 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRFN1Q9P244 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRFN1Q9P244 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.89■□□□□ 0.93
LRFN1Q9P244 AC135279.3-201ENST00000610945 1311 ntBASIC20.89■□□□□ 0.93
LRFN1Q9P244 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.89■□□□□ 0.93
LRFN1Q9P244 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LRFN1Q9P244 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN1Q9P244 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN1Q9P244 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN1Q9P244 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN1Q9P244 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN1Q9P244 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN1Q9P244 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN1Q9P244 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN1Q9P244 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.88■□□□□ 0.93
LRFN1Q9P244 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.88■□□□□ 0.93
LRFN1Q9P244 AC142381.3-201ENST00000568208 1670 ntBASIC20.88■□□□□ 0.93
LRFN1Q9P244 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN1Q9P244 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.88■□□□□ 0.93
LRFN1Q9P244 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN1Q9P244 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN1Q9P244 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN1Q9P244 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.87■□□□□ 0.93
LRFN1Q9P244 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.87■□□□□ 0.93
LRFN1Q9P244 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN1Q9P244 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN1Q9P244 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN1Q9P244 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.87■□□□□ 0.93
LRFN1Q9P244 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN1Q9P244 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN1Q9P244 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 SYT6-210ENST00000641643 1587 ntBASIC20.86■□□□□ 0.93
LRFN1Q9P244 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.86■□□□□ 0.93
LRFN1Q9P244 AC024257.2-201ENST00000549699 147 ntBASIC20.86■□□□□ 0.93
LRFN1Q9P244 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
LRFN1Q9P244 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
LRFN1Q9P244 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
LRFN1Q9P244 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRFN1Q9P244 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LRFN1Q9P244 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
LRFN1Q9P244 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN1Q9P244 AC138932.3-201ENST00000567634 1902 ntBASIC20.85■□□□□ 0.93
LRFN1Q9P244 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.85■□□□□ 0.93
LRFN1Q9P244 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LRFN1Q9P244 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN1Q9P244 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN1Q9P244 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN1Q9P244 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRFN1Q9P244 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
LRFN1Q9P244 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
LRFN1Q9P244 AC099791.2-201ENST00000605725 427 ntBASIC20.84■□□□□ 0.93
LRFN1Q9P244 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.84■□□□□ 0.93
LRFN1Q9P244 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRFN1Q9P244 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LRFN1Q9P244 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms