Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.61■□□□□ 0.89
NPAP1Q9NZP6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NPAP1Q9NZP6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 KRT18P24-201ENST00000344739 1156 ntBASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 AL592295.1-201ENST00000400984 884 ntBASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 AC120024.1-201ENST00000562672 995 ntBASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
NPAP1Q9NZP6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 THA1P-201ENST00000590384 1145 ntBASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 AC141586.4-201ENST00000624558 1573 ntBASIC20.59■□□□□ 0.89
NPAP1Q9NZP6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAP1Q9NZP6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NPAP1Q9NZP6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.58■□□□□ 0.89
NPAP1Q9NZP6 GUSBP5-201ENST00000418136 578 ntBASIC20.58■□□□□ 0.89
NPAP1Q9NZP6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.58■□□□□ 0.89
NPAP1Q9NZP6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPAP1Q9NZP6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NPAP1Q9NZP6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 C1orf229-201ENST00000623686 2258 ntBASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NPAP1Q9NZP6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 AC239859.2-201ENST00000444165 318 ntBASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 AC137767.1-201ENST00000602918 1920 ntBASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NPAP1Q9NZP6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.55■□□□□ 0.88
NPAP1Q9NZP6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 EP400NL-214ENST00000641289 2402 ntBASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NPAP1Q9NZP6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 SLC25A24-204ENST00000569674 2357 ntBASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 C9orf163-202ENST00000624034 2573 ntBASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 FOXO3B-201ENST00000395675 1928 ntBASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAP1Q9NZP6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms