Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.98■■□□□ 1.11
NDE1Q9NXR1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.97■■□□□ 1.11
NDE1Q9NXR1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDE1Q9NXR1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDE1Q9NXR1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 AL157400.5-201ENST00000507624 621 ntBASIC21.95■■□□□ 1.1
NDE1Q9NXR1 AL161729.1-201ENST00000604104 1402 ntBASIC21.95■■□□□ 1.1
NDE1Q9NXR1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDE1Q9NXR1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDE1Q9NXR1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.93■■□□□ 1.1
NDE1Q9NXR1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 SMPD5-203ENST00000639008 1464 ntBASIC21.92■■□□□ 1.1
NDE1Q9NXR1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NDE1Q9NXR1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
NDE1Q9NXR1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.9■■□□□ 1.1
NDE1Q9NXR1 SLC25A24-204ENST00000569674 2357 ntBASIC21.9■■□□□ 1.1
NDE1Q9NXR1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDE1Q9NXR1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDE1Q9NXR1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDE1Q9NXR1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms