Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.28■■□□□ 1
KLHL1Q9NR64 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KLHL1Q9NR64 AP003733.4-201ENST00000623785 1697 ntBASIC21.28■■□□□ 1
KLHL1Q9NR64 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.27■■□□□ 1
KLHL1Q9NR64 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.27■■□□□ 1
KLHL1Q9NR64 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KLHL1Q9NR64 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.27■■□□□ 1
KLHL1Q9NR64 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.27■■□□□ 1
KLHL1Q9NR64 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KLHL1Q9NR64 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KLHL1Q9NR64 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
KLHL1Q9NR64 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 LINC01124-201ENST00000409786 2117 ntBASIC21.25■□□□□ 0.99
KLHL1Q9NR64 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
KLHL1Q9NR64 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
KLHL1Q9NR64 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 MIR4466-201ENST00000606121 54 ntBASIC21.23■□□□□ 0.99
KLHL1Q9NR64 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KLHL1Q9NR64 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.22■□□□□ 0.99
KLHL1Q9NR64 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KLHL1Q9NR64 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KLHL1Q9NR64 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 MIR6722-201ENST00000617286 78 ntBASIC21.2■□□□□ 0.98
KLHL1Q9NR64 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KLHL1Q9NR64 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms