Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GCM1Q9NP62 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
GCM1Q9NP62 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.38■□□□□ 0.69
GCM1Q9NP62 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
GCM1Q9NP62 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
GCM1Q9NP62 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.38■□□□□ 0.69
GCM1Q9NP62 AC141586.4-201ENST00000624558 1573 ntBASIC19.38■□□□□ 0.69
GCM1Q9NP62 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GCM1Q9NP62 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.37■□□□□ 0.69
GCM1Q9NP62 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
GCM1Q9NP62 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
GCM1Q9NP62 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GCM1Q9NP62 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.36■□□□□ 0.69
GCM1Q9NP62 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GCM1Q9NP62 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GCM1Q9NP62 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
GCM1Q9NP62 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GCM1Q9NP62 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.35■□□□□ 0.69
GCM1Q9NP62 MIR6724-1-201ENST00000616420 92 ntBASIC19.35■□□□□ 0.69
GCM1Q9NP62 MIR6724-2-201ENST00000616483 92 ntBASIC19.35■□□□□ 0.69
GCM1Q9NP62 MIR6724-4-201ENST00000617390 92 ntBASIC19.35■□□□□ 0.69
GCM1Q9NP62 MIR6724-3-201ENST00000622482 92 ntBASIC19.35■□□□□ 0.69
GCM1Q9NP62 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GCM1Q9NP62 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GCM1Q9NP62 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
GCM1Q9NP62 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
GCM1Q9NP62 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
GCM1Q9NP62 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.34■□□□□ 0.69
GCM1Q9NP62 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
GCM1Q9NP62 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.34■□□□□ 0.69
GCM1Q9NP62 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GCM1Q9NP62 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.33■□□□□ 0.69
GCM1Q9NP62 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.33■□□□□ 0.69
GCM1Q9NP62 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GCM1Q9NP62 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GCM1Q9NP62 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
GCM1Q9NP62 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GCM1Q9NP62 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GCM1Q9NP62 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GCM1Q9NP62 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GCM1Q9NP62 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.32■□□□□ 0.68
GCM1Q9NP62 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GCM1Q9NP62 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.31■□□□□ 0.68
GCM1Q9NP62 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.31■□□□□ 0.68
GCM1Q9NP62 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GCM1Q9NP62 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.31■□□□□ 0.68
GCM1Q9NP62 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GCM1Q9NP62 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.3■□□□□ 0.68
GCM1Q9NP62 AC005703.6-201ENST00000623265 1329 ntBASIC19.3■□□□□ 0.68
GCM1Q9NP62 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GCM1Q9NP62 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GCM1Q9NP62 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms