Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD8Q9HCK8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD8Q9HCK8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.67■■□□□ 1.06
CHD8Q9HCK8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CHD8Q9HCK8 IGHV3-19-201ENST00000521488 291 ntBASIC21.66■■□□□ 1.06
CHD8Q9HCK8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD8Q9HCK8 AP005435.1-201ENST00000529293 1178 ntBASIC21.66■■□□□ 1.06
CHD8Q9HCK8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.66■■□□□ 1.06
CHD8Q9HCK8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.66■■□□□ 1.06
CHD8Q9HCK8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHD8Q9HCK8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.64■■□□□ 1.06
CHD8Q9HCK8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHD8Q9HCK8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD8Q9HCK8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD8Q9HCK8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.64■■□□□ 1.05
CHD8Q9HCK8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CHD8Q9HCK8 BID-214ENST00000617586 542 ntTSL 5 BASIC21.64■■□□□ 1.05
CHD8Q9HCK8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 GUSBP6-202ENST00000438529 1198 ntBASIC21.63■■□□□ 1.05
CHD8Q9HCK8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD8Q9HCK8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD8Q9HCK8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 AC069152.1-201ENST00000438030 544 ntBASIC21.61■■□□□ 1.05
CHD8Q9HCK8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CHD8Q9HCK8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CHD8Q9HCK8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.6■■□□□ 1.05
CHD8Q9HCK8 FAM201B-201ENST00000458407 597 ntBASIC21.6■■□□□ 1.05
CHD8Q9HCK8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD8Q9HCK8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD8Q9HCK8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD8Q9HCK8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.6■■□□□ 1.05
CHD8Q9HCK8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.59■■□□□ 1.05
CHD8Q9HCK8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.58■■□□□ 1.05
CHD8Q9HCK8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD8Q9HCK8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHD8Q9HCK8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.58■■□□□ 1.05
CHD8Q9HCK8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHD8Q9HCK8 AC073210.2-201ENST00000430369 194 ntBASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms