Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 MIR3621-201ENST00000580529 85 ntBASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRIM62Q9BVG3 AC004812.2-201ENST00000611079 2094 ntBASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM62Q9BVG3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM62Q9BVG3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM62Q9BVG3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM62Q9BVG3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM62Q9BVG3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM62Q9BVG3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TRIM62Q9BVG3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 AC131212.1-201ENST00000613771 668 ntBASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM62Q9BVG3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM62Q9BVG3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM62Q9BVG3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM62Q9BVG3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIM62Q9BVG3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.7■■□□□ 1.38
TRIM62Q9BVG3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM62Q9BVG3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM62Q9BVG3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM62Q9BVG3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM62Q9BVG3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.7■■□□□ 1.38
TRIM62Q9BVG3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM62Q9BVG3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
TRIM62Q9BVG3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms