Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCC1Q96S66 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLCC1Q96S66 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLCC1Q96S66 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLCC1Q96S66 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCC1Q96S66 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCC1Q96S66 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCC1Q96S66 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCC1Q96S66 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLCC1Q96S66 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLCC1Q96S66 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.97■□□□□ 0.63
CLCC1Q96S66 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCC1Q96S66 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCC1Q96S66 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.96■□□□□ 0.63
CLCC1Q96S66 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CLCC1Q96S66 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLCC1Q96S66 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLCC1Q96S66 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.96■□□□□ 0.63
CLCC1Q96S66 AC018755.3-202ENST00000596210 929 ntBASIC18.96■□□□□ 0.63
CLCC1Q96S66 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLCC1Q96S66 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCC1Q96S66 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.95■□□□□ 0.62
CLCC1Q96S66 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCC1Q96S66 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLCC1Q96S66 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCC1Q96S66 ABHD17AP5-201ENST00000580133 923 ntBASIC18.95■□□□□ 0.62
CLCC1Q96S66 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCC1Q96S66 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CLCC1Q96S66 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CLCC1Q96S66 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCC1Q96S66 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLCC1Q96S66 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.94■□□□□ 0.62
CLCC1Q96S66 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCC1Q96S66 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCC1Q96S66 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 SPCS2P3-201ENST00000500401 656 ntBASIC18.94■□□□□ 0.62
CLCC1Q96S66 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLCC1Q96S66 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCC1Q96S66 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CLCC1Q96S66 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.93■□□□□ 0.62
CLCC1Q96S66 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCC1Q96S66 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CLCC1Q96S66 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.93■□□□□ 0.62
CLCC1Q96S66 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CLCC1Q96S66 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCC1Q96S66 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCC1Q96S66 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCC1Q96S66 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCC1Q96S66 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCC1Q96S66 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCC1Q96S66 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CLCC1Q96S66 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLCC1Q96S66 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCC1Q96S66 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CLCC1Q96S66 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCC1Q96S66 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCC1Q96S66 KRT18P60-201ENST00000312876 1297 ntBASIC18.91■□□□□ 0.62
CLCC1Q96S66 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCC1Q96S66 DUX4L9-201ENST00000449051 1259 ntBASIC18.91■□□□□ 0.62
CLCC1Q96S66 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCC1Q96S66 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CLCC1Q96S66 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCC1Q96S66 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCC1Q96S66 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCC1Q96S66 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCC1Q96S66 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCC1Q96S66 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms