Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.6■■□□□ 1.53
CASD1Q96PB1 AC008764.7-201ENST00000593779 1081 ntBASIC24.6■■□□□ 1.53
CASD1Q96PB1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CASD1Q96PB1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CASD1Q96PB1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASD1Q96PB1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.59■■□□□ 1.53
CASD1Q96PB1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASD1Q96PB1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CASD1Q96PB1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.59■■□□□ 1.53
CASD1Q96PB1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CASD1Q96PB1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.59■■□□□ 1.53
CASD1Q96PB1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASD1Q96PB1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CASD1Q96PB1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CASD1Q96PB1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.58■■□□□ 1.53
CASD1Q96PB1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.58■■□□□ 1.53
CASD1Q96PB1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CASD1Q96PB1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CASD1Q96PB1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.58■■□□□ 1.53
CASD1Q96PB1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CASD1Q96PB1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.58■■□□□ 1.53
CASD1Q96PB1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.52
CASD1Q96PB1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.58■■□□□ 1.52
CASD1Q96PB1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CASD1Q96PB1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
CASD1Q96PB1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
CASD1Q96PB1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
CASD1Q96PB1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CASD1Q96PB1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.57■■□□□ 1.52
CASD1Q96PB1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.57■■□□□ 1.52
CASD1Q96PB1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
CASD1Q96PB1 AC136469.2-201ENST00000623944 1028 ntBASIC24.57■■□□□ 1.52
CASD1Q96PB1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASD1Q96PB1 AL161729.1-201ENST00000604104 1402 ntBASIC24.57■■□□□ 1.52
CASD1Q96PB1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.57■■□□□ 1.52
CASD1Q96PB1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
CASD1Q96PB1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CASD1Q96PB1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.56■■□□□ 1.52
CASD1Q96PB1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CASD1Q96PB1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.56■■□□□ 1.52
CASD1Q96PB1 AC099791.1-201ENST00000416440 715 ntBASIC24.56■■□□□ 1.52
CASD1Q96PB1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.56■■□□□ 1.52
CASD1Q96PB1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.56■■□□□ 1.52
CASD1Q96PB1 MIR6821-201ENST00000617625 74 ntBASIC24.56■■□□□ 1.52
CASD1Q96PB1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CASD1Q96PB1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASD1Q96PB1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASD1Q96PB1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASD1Q96PB1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.55■■□□□ 1.52
CASD1Q96PB1 MIR3181-201ENST00000578512 73 ntBASIC24.55■■□□□ 1.52
CASD1Q96PB1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.55■■□□□ 1.52
CASD1Q96PB1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASD1Q96PB1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CASD1Q96PB1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CASD1Q96PB1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASD1Q96PB1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.54■■□□□ 1.52
CASD1Q96PB1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASD1Q96PB1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CASD1Q96PB1 AC009086.3-201ENST00000623486 1008 ntBASIC24.54■■□□□ 1.52
CASD1Q96PB1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.54■■□□□ 1.52
CASD1Q96PB1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.54■■□□□ 1.52
CASD1Q96PB1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASD1Q96PB1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CASD1Q96PB1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.53■■□□□ 1.52
CASD1Q96PB1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CASD1Q96PB1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.53■■□□□ 1.52
CASD1Q96PB1 AC097381.1-201ENST00000429019 1296 ntBASIC24.53■■□□□ 1.52
CASD1Q96PB1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CASD1Q96PB1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.53■■□□□ 1.52
CASD1Q96PB1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.53■■□□□ 1.52
CASD1Q96PB1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CASD1Q96PB1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.53■■□□□ 1.52
CASD1Q96PB1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASD1Q96PB1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASD1Q96PB1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CASD1Q96PB1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASD1Q96PB1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CASD1Q96PB1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.52■■□□□ 1.52
CASD1Q96PB1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.52■■□□□ 1.52
CASD1Q96PB1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CASD1Q96PB1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASD1Q96PB1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASD1Q96PB1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASD1Q96PB1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CASD1Q96PB1 AC104564.3-201ENST00000582367 638 ntBASIC24.51■■□□□ 1.51
CASD1Q96PB1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.51■■□□□ 1.51
CASD1Q96PB1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CASD1Q96PB1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.51■■□□□ 1.51
CASD1Q96PB1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CASD1Q96PB1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 IRS3P-201ENST00000223076 1006 ntBASIC24.49■■□□□ 1.51
CASD1Q96PB1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CASD1Q96PB1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms