Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.73■■□□□ 1.39
ZSWIM3Q96MP5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 AL138724.1-201ENST00000606771 1088 ntBASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 HLA-L-211ENST00000482052 1765 ntBASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZSWIM3Q96MP5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZSWIM3Q96MP5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZSWIM3Q96MP5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZSWIM3Q96MP5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZSWIM3Q96MP5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 AC099791.1-201ENST00000416440 715 ntBASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 AC027682.1-201ENST00000562846 899 ntBASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 AC241377.3-202ENST00000626088 1088 ntBASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 AC241585.3-202ENST00000628937 1088 ntBASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 AC245100.8-202ENST00000629247 1058 ntBASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.68■■□□□ 1.38
ZSWIM3Q96MP5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 MIR6821-201ENST00000617625 74 ntBASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.67■■□□□ 1.38
ZSWIM3Q96MP5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 MIR3181-201ENST00000578512 73 ntBASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 AC136469.2-201ENST00000623944 1028 ntBASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
ZSWIM3Q96MP5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 AC097381.1-201ENST00000429019 1296 ntBASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
ZSWIM3Q96MP5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ZSWIM3Q96MP5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
ZSWIM3Q96MP5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 AC104564.3-201ENST00000582367 638 ntBASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 AC087623.3-201ENST00000607047 1098 ntBASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.64■■□□□ 1.37
ZSWIM3Q96MP5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms