Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.13■□□□□ 0.65
NEIL1Q96FI4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEIL1Q96FI4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NEIL1Q96FI4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEIL1Q96FI4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEIL1Q96FI4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.12■□□□□ 0.65
NEIL1Q96FI4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEIL1Q96FI4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEIL1Q96FI4 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.12■□□□□ 0.65
NEIL1Q96FI4 AL117332.1-201ENST00000622628 974 ntBASIC19.12■□□□□ 0.65
NEIL1Q96FI4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEIL1Q96FI4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 AC138932.3-201ENST00000567634 1902 ntBASIC19.1■□□□□ 0.65
NEIL1Q96FI4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 MIR3621-201ENST00000580529 85 ntBASIC19.1■□□□□ 0.65
NEIL1Q96FI4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEIL1Q96FI4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.09■□□□□ 0.65
NEIL1Q96FI4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 AC005703.6-201ENST00000623265 1329 ntBASIC19.09■□□□□ 0.65
NEIL1Q96FI4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.09■□□□□ 0.65
NEIL1Q96FI4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.08■□□□□ 0.65
NEIL1Q96FI4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.08■□□□□ 0.65
NEIL1Q96FI4 AC008406.3-201ENST00000620001 1374 ntBASIC19.08■□□□□ 0.65
NEIL1Q96FI4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NEIL1Q96FI4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEIL1Q96FI4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.08■□□□□ 0.65
NEIL1Q96FI4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEIL1Q96FI4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NEIL1Q96FI4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 AC133561.1-201ENST00000568600 2415 ntBASIC19.06■□□□□ 0.64
NEIL1Q96FI4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 AC012676.1-201ENST00000574705 1949 ntBASIC19.06■□□□□ 0.64
NEIL1Q96FI4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEIL1Q96FI4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEIL1Q96FI4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms