Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCD2Q92925 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCD2Q92925 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCD2Q92925 AC006455.2-201ENST00000429931 906 ntBASIC23.63■■□□□ 1.37
SMARCD2Q92925 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCD2Q92925 AL161729.1-201ENST00000604104 1402 ntBASIC23.63■■□□□ 1.37
SMARCD2Q92925 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.63■■□□□ 1.37
SMARCD2Q92925 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.63■■□□□ 1.37
SMARCD2Q92925 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCD2Q92925 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SMARCD2Q92925 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCD2Q92925 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 IRS3P-201ENST00000223076 1006 ntBASIC23.62■■□□□ 1.37
SMARCD2Q92925 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCD2Q92925 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCD2Q92925 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 AC009086.3-201ENST00000623486 1008 ntBASIC23.62■■□□□ 1.37
SMARCD2Q92925 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCD2Q92925 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCD2Q92925 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCD2Q92925 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.61■■□□□ 1.37
SMARCD2Q92925 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.61■■□□□ 1.37
SMARCD2Q92925 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCD2Q92925 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCD2Q92925 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCD2Q92925 MIR3181-201ENST00000578512 73 ntBASIC23.6■■□□□ 1.37
SMARCD2Q92925 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
SMARCD2Q92925 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCD2Q92925 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.59■■□□□ 1.37
SMARCD2Q92925 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.59■■□□□ 1.37
SMARCD2Q92925 AC087623.3-201ENST00000607047 1098 ntBASIC23.59■■□□□ 1.37
SMARCD2Q92925 AC233992.3-201ENST00000607491 485 ntBASIC23.59■■□□□ 1.37
SMARCD2Q92925 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.59■■□□□ 1.37
SMARCD2Q92925 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.59■■□□□ 1.37
SMARCD2Q92925 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SMARCD2Q92925 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCD2Q92925 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SMARCD2Q92925 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SMARCD2Q92925 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SMARCD2Q92925 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMARCD2Q92925 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMARCD2Q92925 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.58■■□□□ 1.37
SMARCD2Q92925 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SMARCD2Q92925 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.58■■□□□ 1.36
SMARCD2Q92925 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SMARCD2Q92925 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCD2Q92925 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCD2Q92925 BX842568.3-201ENST00000418104 571 ntBASIC23.57■■□□□ 1.36
SMARCD2Q92925 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.57■■□□□ 1.36
SMARCD2Q92925 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.57■■□□□ 1.36
SMARCD2Q92925 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCD2Q92925 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.57■■□□□ 1.36
SMARCD2Q92925 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.57■■□□□ 1.36
SMARCD2Q92925 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SMARCD2Q92925 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCD2Q92925 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCD2Q92925 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SMARCD2Q92925 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SMARCD2Q92925 HLA-L-211ENST00000482052 1765 ntBASIC23.55■■□□□ 1.36
SMARCD2Q92925 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.55■■□□□ 1.36
SMARCD2Q92925 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SMARCD2Q92925 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCD2Q92925 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCD2Q92925 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCD2Q92925 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.55■■□□□ 1.36
SMARCD2Q92925 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SMARCD2Q92925 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCD2Q92925 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms