Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP3S1Q92572 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
AP3S1Q92572 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP3S1Q92572 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S1Q92572 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.05■□□□□ 0.8
AP3S1Q92572 AC242852.2-201ENST00000615738 1807 ntBASIC20.05■□□□□ 0.8
AP3S1Q92572 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S1Q92572 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.05■□□□□ 0.8
AP3S1Q92572 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S1Q92572 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.05■□□□□ 0.8
AP3S1Q92572 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S1Q92572 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.05■□□□□ 0.8
AP3S1Q92572 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S1Q92572 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP3S1Q92572 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3S1Q92572 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3S1Q92572 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3S1Q92572 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
AP3S1Q92572 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.04■□□□□ 0.8
AP3S1Q92572 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3S1Q92572 DUX4L29-201ENST00000425409 679 ntBASIC20.04■□□□□ 0.8
AP3S1Q92572 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
AP3S1Q92572 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP3S1Q92572 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
AP3S1Q92572 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AP3S1Q92572 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.04■□□□□ 0.8
AP3S1Q92572 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.03■□□□□ 0.8
AP3S1Q92572 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
AP3S1Q92572 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP3S1Q92572 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.02■□□□□ 0.8
AP3S1Q92572 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.02■□□□□ 0.8
AP3S1Q92572 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
AP3S1Q92572 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.02■□□□□ 0.8
AP3S1Q92572 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP3S1Q92572 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP3S1Q92572 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
AP3S1Q92572 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
AP3S1Q92572 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP3S1Q92572 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.01■□□□□ 0.79
AP3S1Q92572 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.01■□□□□ 0.79
AP3S1Q92572 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP3S1Q92572 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
AP3S1Q92572 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20■□□□□ 0.79
AP3S1Q92572 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
AP3S1Q92572 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20■□□□□ 0.79
AP3S1Q92572 MED25-210ENST00000612854 801 ntTSL 5 BASIC20■□□□□ 0.79
AP3S1Q92572 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 MED25-214ENST00000622402 642 ntTSL 5 BASIC20■□□□□ 0.79
AP3S1Q92572 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20■□□□□ 0.79
AP3S1Q92572 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20■□□□□ 0.79
AP3S1Q92572 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
AP3S1Q92572 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.99■□□□□ 0.79
AP3S1Q92572 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S1Q92572 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
AP3S1Q92572 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S1Q92572 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
AP3S1Q92572 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.99■□□□□ 0.79
AP3S1Q92572 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.99■□□□□ 0.79
AP3S1Q92572 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP3S1Q92572 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.99■□□□□ 0.79
AP3S1Q92572 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S1Q92572 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
AP3S1Q92572 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
AP3S1Q92572 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
AP3S1Q92572 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S1Q92572 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S1Q92572 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP3S1Q92572 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
AP3S1Q92572 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms