Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CASKIN1Q8WXD9 AC091305.1-201ENST00000479476 895 ntBASIC35.92■■■■□ 3.34
CASKIN1Q8WXD9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CASKIN1Q8WXD9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CASKIN1Q8WXD9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CASKIN1Q8WXD9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC35.91■■■■□ 3.34
CASKIN1Q8WXD9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CASKIN1Q8WXD9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CASKIN1Q8WXD9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC35.91■■■■□ 3.34
CASKIN1Q8WXD9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CASKIN1Q8WXD9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC35.9■■■■□ 3.34
CASKIN1Q8WXD9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC35.9■■■■□ 3.34
CASKIN1Q8WXD9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
CASKIN1Q8WXD9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.9■■■■□ 3.34
CASKIN1Q8WXD9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 AC136469.2-201ENST00000623944 1028 ntBASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 AC241377.3-202ENST00000626088 1088 ntBASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 AC241585.3-202ENST00000628937 1088 ntBASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 AC245100.8-202ENST00000629247 1058 ntBASIC35.89■■■■□ 3.34
CASKIN1Q8WXD9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CASKIN1Q8WXD9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC35.88■■■■□ 3.33
CASKIN1Q8WXD9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC35.88■■■■□ 3.33
CASKIN1Q8WXD9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CASKIN1Q8WXD9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CASKIN1Q8WXD9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
CASKIN1Q8WXD9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC35.87■■■■□ 3.33
CASKIN1Q8WXD9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CASKIN1Q8WXD9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC35.87■■■■□ 3.33
CASKIN1Q8WXD9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CASKIN1Q8WXD9 AC027682.1-201ENST00000562846 899 ntBASIC35.86■■■■□ 3.33
CASKIN1Q8WXD9 MAG-206ENST00000597035 542 ntTSL 4 BASIC35.86■■■■□ 3.33
CASKIN1Q8WXD9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC35.85■■■■□ 3.33
CASKIN1Q8WXD9 ALDH1A3-203ENST00000557963 1670 ntBASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC35.84■■■■□ 3.33
CASKIN1Q8WXD9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 CA15P2-201ENST00000611168 834 ntBASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC35.83■■■■□ 3.33
CASKIN1Q8WXD9 RASA4CP-201ENST00000424092 1398 ntBASIC35.82■■■■□ 3.33
CASKIN1Q8WXD9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC35.82■■■■□ 3.33
CASKIN1Q8WXD9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC35.82■■■■□ 3.33
CASKIN1Q8WXD9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC35.82■■■■□ 3.33
CASKIN1Q8WXD9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC35.82■■■■□ 3.33
CASKIN1Q8WXD9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CASKIN1Q8WXD9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
CASKIN1Q8WXD9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
CASKIN1Q8WXD9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CASKIN1Q8WXD9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC35.82■■■■□ 3.32
CASKIN1Q8WXD9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
CASKIN1Q8WXD9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
CASKIN1Q8WXD9 AC022211.4-201ENST00000625094 2161 ntBASIC35.81■■■■□ 3.32
CASKIN1Q8WXD9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC35.81■■■■□ 3.32
CASKIN1Q8WXD9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC35.81■■■■□ 3.32
CASKIN1Q8WXD9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC35.81■■■■□ 3.32
CASKIN1Q8WXD9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC35.8■■■■□ 3.32
CASKIN1Q8WXD9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CASKIN1Q8WXD9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
CASKIN1Q8WXD9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
CASKIN1Q8WXD9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC35.79■■■■□ 3.32
CASKIN1Q8WXD9 AC009086.3-201ENST00000623486 1008 ntBASIC35.79■■■■□ 3.32
CASKIN1Q8WXD9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
CASKIN1Q8WXD9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CASKIN1Q8WXD9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC35.77■■■■□ 3.32
CASKIN1Q8WXD9 HES6-206ENST00000409574 738 ntTSL 2 BASIC35.77■■■■□ 3.32
CASKIN1Q8WXD9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.77■■■■□ 3.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms